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Browsing University of Hertfordshire by Author "Schilstra, M."
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SBML models and MathSBML
Shapiro, B.E.; Finney, A.; Hucka, M.; Bornstein, B.; Funahashi, A.; Jouraku, A.; Keating, S.; Le Novere, N.; Matthews, J.; Schilstra, M. (Springer Nature, 2007)MathSBML is an open-source, freely-downloadable Mathematica package that facilitates working with Systems Biology Markup Language (SBML) models. SBML is a toolneutral,computer-readable format for representing models of ... -
Similarity between electron donor side reactions in the solubilized Photosystem II–LHC II supercomplex and Photosystem-II-containing membranes
Schilstra, M.; Nield, J.; Dorner, W.; Hankamer, B.; Carradus, M.; Barter, L.; Barber, J.; Klug, D.R. (1999)The PS II–LHC II supercomplex is a novel type of oxygen evolving Photosystem II (PS II) core particle that contains the light harvesting complex proteins Lhcb1/2/4/5 in addition to the PS II reaction centre, oxygen evolving ... -
A simple formulation of microtubule dynamics: quantitative implications of the dynamic instability of microtubule
Bayley, P.M.; Schilstra, M.; Martin, S.R. (1989)A simple formulation of microtubule dynamic instability is presented, which is based on the experimental observations by T. Horio and H. Hotani of coexisting, interconverting growing and shrinking microtubules. Employing ... -
Simple stochastic simulation
Schilstra, M.; Martin, S.R. (Elsevier, 2009)Stochastic simulations may be used to describe changes with time of a reaction system in a way that explicitly accounts for the fact that molecules show a significant degree of randomness in their dynamic behavior. The ... -
A statistical approach to distinguish between different DNA functional parts
Abnizova, I.; Schilstra, M.; Te Boekhorst, R.; Nehaniv, C.L. (2003) -
Stochastic model of template-directed elongation processes in biology
Schilstra, M.; Nehaniv, C.L. (2010)We present a novel modular, stochastic model for biological template-based linear chain elongation processes. In this model, elongation complexes (ECs; DNA polymerase, RNA polymerase, or ribosomes associated with nascent ... -
Substrates and products in lipoxygenase biocatalysis
Veldink, G.A.; Nieuwenhuizen, W.F.; Schilstra, M.; Vliegenthart, J.F.G. (Friedrich Vieweg & Sons Verlagsgesellschaft mbH, 1995) -
Symmetry structure in discrete models of biochemical systems : natural subsystems and the weak control hierarchy in a new model of computation driven by interactions
Nehaniv, C.L.; Rhodes, John; Egri-Nagy, Attila; Dini, Paolo; Rothstein Morris, Eric; Horvath, Gabor; Karimi, Fariba; Schreckling, Daniel; Schilstra, M. (2015-07-28)Interaction Computing (IC) is inspired by the observation that cell metabolic/regulatory systems construct order dynamically, through constrained interactions between their components and based on a wide range of possible ... -
The Temperature Dependence of P680+ Reduction in Oxygen-Evolving Photosystem II
Jeans, C.; Schilstra, M.; Klug, D.R. (2002) -
Three-dimensional image reconstruction of helical aggregates of trypsin modified elongation factor EF-Tu from Escherichia coli
Schilstra, M.; Cremers, A.F.M.; Bosch, L.; Mellema, J.E. (1986)The three-dimensional structure of trypsin-modified EF-Tu polymers was analyzed to a resolution of 30 Å with electron image reconstruction techniques after negative staining. In a 70% saturated ammonium sulfate solution ... -
βCaMKII regulates bidirectional long-term plasticity in cerebellar Purkinje cells by a CaMKII/PP2B switch mechanism
Matos Pinto, Thiago; Schilstra, M.; Steuber, Volker; Roque, Antonio (2014-07-21)