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dc.contributor.authorSchilstra, M.
dc.contributor.authorLi, L.
dc.contributor.authorMatthews, J.
dc.contributor.authorFinney, A.
dc.contributor.authorHucka, M.
dc.contributor.authorLe Novere, N.
dc.date.accessioned2008-09-05T08:11:37Z
dc.date.available2008-09-05T08:11:37Z
dc.date.issued2006
dc.identifier.citationSchilstra , M , Li , L , Matthews , J , Finney , A , Hucka , M & Le Novere , N 2006 , ' CellML2SBML : conversion of CellML into SBML ' , Bioinformatics , vol. 22 , no. 8 , pp. 1018-1020 . https://doi.org/10.1093/bioinformatics/btl047
dc.identifier.otherPURE: 96200
dc.identifier.otherPURE UUID: 4160875c-228b-4bcb-a32e-996f94141bd6
dc.identifier.otherdspace: 2299/2362
dc.identifier.otherScopus: 33645803833
dc.identifier.urihttp://hdl.handle.net/2299/2362
dc.description“This is a pre-copy-editing, author produced PDF of an article accepted for publication in Bioinformatics following peer review. The definitive publisher-authenticated version Schilstra, M. , Li, L. , Matthews, J. , Finney, A. and Hucka, M. (2006) 'CellML2SBML: conversion of CellML into SBML'. Bioinformatics 22 pp.1018-1020 is available online at: http://bioinformatics.oxfordjournals.org/archive/index.dtl" Copyright Oxford University Press DOI: 10.1093/bioinformatics/btl047
dc.description.abstractCellML and SBML are XML-based languages for storage and exchange of molecular biological and physiological reaction models. They use very similar subsets of MathML to specify the mathematical aspects of the models. CellML2SBML is implemented as a suite of XSLT stylesheets that, when applied consecutively, convert models expressed in CellML into SBML without significant loss of information. The converter is based on the most recent stable versions of the languages (CellML version 1.1; SBML Level 2 Version 1), and the XSLT used in the stylesheets adheres to the XSLT version 1.0 specification. Of all 306 models in the CellML repository in April 2005, CellML2SBML converted 91% automatically into SBML. Minor manual changes to the unit definitions in the originals raised the percentage of successful conversions to 96%en
dc.language.isoeng
dc.relation.ispartofBioinformatics
dc.rightsOpen
dc.titleCellML2SBML : conversion of CellML into SBMLen
dc.contributor.institutionSchool of Computer Science
dc.contributor.institutionCentre for Computer Science and Informatics Research
dc.contributor.institutionScience & Technology Research Institute
dc.description.statusPeer reviewed
dc.relation.schoolSchool of Computer Science
dcterms.dateAccepted2006
rioxxterms.versionofrecordhttps://doi.org/10.1093/bioinformatics/btl047
rioxxterms.typeJournal Article/Review
herts.preservation.rarelyaccessedtrue
herts.rights.accesstypeOpen


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